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Napistu in R!

The napistu R package which is part of the Napitsu project.

Repo Contents

  • Functions for working with bioconductor’s organism-specific packages.
  • Functions for querying Open Target’s graphQL database to summarize targets and their top indications.
  • Shiny modules and related functions for exploring networks interactively.

Setup directions

This package can be installed in several ways:

  1. Install from GitHub with a PAT:
    1. Install napistu-r in an interactive R session using remotes (or devtools) from GitHub:
remotes::install_github("napistu/napistu-r")
  1. Clone and build locally:
!bash
git clone https://github.com/napistu/napistu-r.git
R CMD build napistu-r